Finally....
I took my machine apart and replaced the cooling paste on the CPU (again), and removed the stock cooling paste on the chipset and the GPU.
After booting up the GPU core was at 96 degrees celcius and rising
Took the system apart again, and I noticed that while I had replaced the cooling paste, the copper wasn't touching the GPU and the chipset correctly. WHAT??!!
Since I had thrown out the paste-oem-goo that came with the thinkpad (it was sort of fractured anyway), and couldn't use it anymore.
I decided to bend the cooler just a bit (at the heatpipe that connects it to the rest of the cooler) making it touch the GPU and Chipset as much as possible. Re-applied cooling paste (more than one would normally do to make certain it touched the copper).
The picture seems a little better... however more can be done for the GPU I think:
Idle:
CPU: 51
GPU: 69
Fan: 3470 rpms
Heavy load:
CPU: 82-86
GPU: 97-102
Fan: 3500 rpms
(all in degrees celcius)
To conclude it all, it seems like the cooling system is incredibly fragile, to temperatures from the GPU, but thats no wonder as its a compromise of space (and cost probably). And ofcourse me sticking my fingers where they don't belong
I'm well open to ideas on what to improve the situation with. I thought about purchasing some cooling that would aid heat dissipation/spreading across more physical space, and improve the contact on the GPU aswell.
While writing this piece, the temp levels has fallen down to these levels:
CPU: 55
GPU: 73
Fan: 3470
Just to be on the safe side, I ordered a replacement fan from lenovo. They are suprisingly cheap, and it wouldn't hurt to have an extra lying around. The FRU number is 41V9932 (for my 2007-93G model atleast) if anyone is interested.
I will write more as the search continues for improving the cooling of my thinkpad....